CDS

Accession Number TCMCG018C25031
gbkey CDS
Protein Id XP_031740283.1
Location complement(join(26150345..26150431,26150726..26150794,26150890..26150956,26151091..26151158,26151457..26151567,26151688..26151745,26151843..26151879,26152129..26152222,26152431..26152496,26152606..26152670,26152786..26152930,26153081..26153152,26153469..26153618,26153776..26153845,26154641..26154717,26154849..26154917,26155007..26155090,26155550..26155593,26155705..26155845,26155957..26156155,26156817..26156945,26157107..26157190,26157390..26157503,26158306..26158413,26158497..26158592,26158851..26158919,26159092..26159193,26159349..26159444,26159577..26159660,26160477..26160594,26160677..26160753,26161098..26161286,26161380..26161627,26161979..26162129,26162831..26162947,26163345..26163452,26163623..26163722,26163944..26164017,26164631..26164645))
Gene LOC101203163
GeneID 101203163
Organism Cucumis sativus

Protein

Length 1283aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA182750
db_source XM_031884423.1
Definition NPC intracellular cholesterol transporter 1 isoform X2 [Cucumis sativus]

EGGNOG-MAPPER Annotation

COG_category I
Description Niemann-Pick C1
KEGG_TC 2.A.6.6
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko02000        [VIEW IN KEGG]
KEGG_ko ko:K12385        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04142        [VIEW IN KEGG]
ko04979        [VIEW IN KEGG]
map04142        [VIEW IN KEGG]
map04979        [VIEW IN KEGG]
GOs GO:0000323        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005496        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005576        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005764        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0005887        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006486        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006869        [VIEW IN EMBL-EBI]
GO:0007034        [VIEW IN EMBL-EBI]
GO:0007041        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008202        [VIEW IN EMBL-EBI]
GO:0008206        [VIEW IN EMBL-EBI]
GO:0008289        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009100        [VIEW IN EMBL-EBI]
GO:0009101        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010876        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015485        [VIEW IN EMBL-EBI]
GO:0015850        [VIEW IN EMBL-EBI]
GO:0015918        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016021        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0030301        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0031226        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0032934        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0042632        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043178        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043413        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044459        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048471        [VIEW IN EMBL-EBI]
GO:0048878        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0055088        [VIEW IN EMBL-EBI]
GO:0055092        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070085        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901137        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901615        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAATTCTGTTGCTGTTCTATGTTTTGTCCTAGTGTATGCAGAGATGTCTAATACAGGGTTGCAGTTATCTACGAATGGGACATCCGGGGAAAAACACTCCGAAGGATATTGTGTAATGTATGGCATCTGTGCAAAGCGACCTGATGGTAAAGCGCTGAACTGTCCTACGGGTGCCCCATCTGTGCAGCCAGATAATCTTCTATCATCGAAGATCCAAAGTCTATGTCCAACTATTACCGGCAATGTTTGTTGCACAGAACAACAATTTGACACCCTACGATCACAAGTTATGCAAGCTATTCCATTTCTTGTAGGTTGTCCAGCATGCTTAAGGAACTTTTTGAACCTGTTCTGTGAGCTTACCTGTTCTCCAAATCAGAGCTTATTCATAAATGTAACTTCTGTTTTAAAGGTTAATAACAGCCTTACAGTTGATGCCATTGATTATTATGTAGCTGATGCTTTTGGTGAAGGGCTATATGAGTCCTGCAAAGATGTAAAATATGGTACAATGAACACTCGAGCCATGCAATTTATTGGTGCCGATGCTAAAAATTTTAAAGAGTGGTTTGCTTTTATCGGTAAACAAGCTGGCCCTGGCTTGCCTGGTTCACCATATGCCATTGGATTTCCACCTACGATGTCTGTGTCATCCGGAATGAAGCATATGAATGCATCTGCTTATTCTTGTGGAGATACTTCACTGGGATGTTCCTGTGGTGATTGCCCTTCAGCACCGGTCTGCAGTAGCACTGCAACCCCCGTTTTCCATAGAAAAAATTCTTGTTCAGTTAAAATTGGGTCTCTCAAGGTTAAATGTGTTGACTTCACTCTGTGTATCCTGTACATTATAATTGCCTCTGCTTTTCTTGGATGGAGTTTGTTTTATCGCAAATCCCAAAAGAGCCCTTCTTCGGGAACTAAAACAATGCCAAATATCATGGATGGGGGCAGTCTCCATTCTGCTACTCGGAAAAAGGATGAAAGTTTGCCAATGCAGATGCTTGAAGATGCTCCTCAAATCAGAAGTAGGATTCAGCTTTCAGTTGTTCAGGGATACATGTCCAATTTTTACAGGAAATATGGAACATGGGTGGCCAGAAATCCGACATTGGTGTTGATTTCATCACTGGCCATTGTTCTACTTCTGTGTATAGGTCTCCTTCGTTTCAAGGTGGAGACAAGGCCTGATAAGCTATGGGTAGGACCAGGAAGCAAAGCATCCCAGGAGAAGGAATTTTTTGATTCACATCTAGCCCCTTTTTATAGGATTGAACAGATTATAATAGCCACAGTTCCAGATTCCGTGCATGGAAAGCCGCCAAGTATATTGAATGATAACAATGTTAAGTTATTGTTTGACATACAAAAGAAGATAGATGGTATTCGAGCTAATTATTCTGGTAGAAGTATATCTCTAAGTGACATTTGTATGAAGCCACTGGATCAGGAATGTGCCACCCAGAGTGTCCTGCAGTATTTCCAAATGAATCCAGAAAATGTTGATAACTATGGAGGAGTCGATCATCTTGAATATTGTTTTCAGCACTATTCCTCTGCAGACAGTTGCAGGAGTGCATTTGAAGCTCCACTTGATCCAAGCACCGCATTAGGTGGATTCTCTGGGAACAATTATTCAGAAGCTTCTGCATTCTTAATAACTTACCCAGTAAACAATGCTATTAATAAAGAAGGGAATGAATCTGGACCAGCTGTGGCTTGGGAGAAAGCCTTCATTCAGTTGGCTAAGGCTGAGTTATTGACAATGACGCAATCTCAAAATTTGACGCTTTCTTTTTCTTCGGAAAGCTCCATTGAAGAAGAATTAAAAAGAGAGAGTACTGCTGATGTCATCACGATCTTGATAAGCTATCTTGTGATGTTTGCTTACATATCTCTTACTTTGGGTGATAGACCACATTTATCTACTTTTTACGTTTCATCAAAGGTGTTACTTGGTCTCTCTGGAGTTGTACTTGTCATGTTGTCTGTTCTTGCATCAGTAGGTTTTTTCAGTGCAATTGGAGTTAAATCTACTCTAATCATTATGGAAGTCATTCCTTTCCTTGTTCTGGCAGTTGGGGTGGATAATATGTGTATATTGGTACATGCTGTTAAACGGCAGTCAGTAGAATTGCCTTTGGAAGGACGAATTAGTAATGCACTTGTAGAAGTTGGACCATCCATAACACTAGCAAGTTTATCTGAGGTTCTTGCATTTGCAGTTGGAAGTTTCATTCCTATGCCAGCATGTCGTGTTTTTTCCATGTTTGCAGCATTAGCCGTTCTTCTGGACTTCCTGCTTCAAGTTACAGCTTTTGTTGCTTTAATAGTATTTGATTTTCTAAGAACGGAGGATAAGAGAGTGGACTGCTTTCCTTGTATTAAGAGCTCAAGATATGCTGGCAGTGATAAAGGTATCACTCAGAAGAATCCTGGCTTGTTAGCTCGATACATGAAGGAGATCCATGCACCAGCACTTAGCATCTGGATAGTCAAAATAATAGTCATATCCATCTTTGTTGGGTTCACATTGGCAAGCATAGCTTTGTGCACCAGAATTGAAGCTGGTTTGGAACAAAAGATTGTGCTACCCAAAGATTCTTATCTTCAGGGGTACTTCAATAACATCTCTGAACATCTCAGAATAGGTCCACCGGTATATTTCGTTGTAAAGAACTACAATTACAGCTCAGAATCAAGACAGACAAACCAATTATGCTCCATCAGTCAATGTGACTCAGACTCTCTTTTAAATGAGATTGCAAAAGCTTCACTAATACCAGAGTCAAGTTTCATTGCCAAACCAGCTGCTTCATGGCTTGATGATTATCTTGTGTGGATATCTCCCGAAGCATTTGGATGTTGTCGGAAGTTCACAAATGGGAGCTATTGCCCCCCTGATGATCAGCCCCCTTGCTGTACTTCAAGCGGTGGTGGTGGTTCTTGTGGTCTGAATGGAGTATGCAAAGATTGTACAACGTGCTTTCTTCATTCGGATCTAAATGGTGGTAGGCCATCTACTGCCCAATTTAAGGAGAAATTGCCATGGTTCCTTAGTGCTCTACCTTCTGCTGATTGTGCTAAAGGAGGTCATGGGGCATACACCAGCAGTGTTGATCTGAAAGACTATGAAAATGGTGTTATTCAAGCATCCTCTTTCAGAACATACCATACTCCCCTGAATAAGCAGGTTGACTATATTAATTCAATGAGGGCTGCTCAAGAATTGAGTTCGAGGCTTTCTGATTCTTTGAAGATAGAGATCTTTCCATACTCTGTATTTTACATGTTTTTTGAGCAATACCTCAATATATGGAGGACAGCATTGATCAACCTTGCCATTGCTATTGGTGCGGTTTTTATTGTGTGCCTGATCATCACATGCAGCTTATGGACCTCGGCTATCATTTTGTTGGTGTTGGCAATGATTATTGTGGATCTCATGGGCGTGATGGCAATTTTGAATATCCAATTGAACGCAATCTCTGTCGTCAATCTTGTCATGTCTGTGGGAATTGCTGTTGAATTTTGTGTGCATTTGACACATGCTTTCTCGGTAAGCAGCGGAGATAGGAATCAACGGATGAAGGAGGCTCTTAGTACAATGGGAGCATCTGTTCTTAGTGGAATCACACTAACAAAGCTAGTCGGGGTCCTTGTACTTTGCTTCTCTAGAACTGAAGTTTTTGTGGTCTATTATTTCCATGTGTACTTGGCATTAGTTCTTCTTGGGTTTTTGCACGGCCTCGTATTCTTGCCGGTAGTGTTGAGCTTGTTCGGTCCACCTTCGAGATGTGTATTCGTCGAGCAACAGGACAATCGACCCTCTACTTCGTCTCAGTCATAA
Protein:  
MNSVAVLCFVLVYAEMSNTGLQLSTNGTSGEKHSEGYCVMYGICAKRPDGKALNCPTGAPSVQPDNLLSSKIQSLCPTITGNVCCTEQQFDTLRSQVMQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVLKVNNSLTVDAIDYYVADAFGEGLYESCKDVKYGTMNTRAMQFIGADAKNFKEWFAFIGKQAGPGLPGSPYAIGFPPTMSVSSGMKHMNASAYSCGDTSLGCSCGDCPSAPVCSSTATPVFHRKNSCSVKIGSLKVKCVDFTLCILYIIIASAFLGWSLFYRKSQKSPSSGTKTMPNIMDGGSLHSATRKKDESLPMQMLEDAPQIRSRIQLSVVQGYMSNFYRKYGTWVARNPTLVLISSLAIVLLLCIGLLRFKVETRPDKLWVGPGSKASQEKEFFDSHLAPFYRIEQIIIATVPDSVHGKPPSILNDNNVKLLFDIQKKIDGIRANYSGRSISLSDICMKPLDQECATQSVLQYFQMNPENVDNYGGVDHLEYCFQHYSSADSCRSAFEAPLDPSTALGGFSGNNYSEASAFLITYPVNNAINKEGNESGPAVAWEKAFIQLAKAELLTMTQSQNLTLSFSSESSIEEELKRESTADVITILISYLVMFAYISLTLGDRPHLSTFYVSSKVLLGLSGVVLVMLSVLASVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQSVELPLEGRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMFAALAVLLDFLLQVTAFVALIVFDFLRTEDKRVDCFPCIKSSRYAGSDKGITQKNPGLLARYMKEIHAPALSIWIVKIIVISIFVGFTLASIALCTRIEAGLEQKIVLPKDSYLQGYFNNISEHLRIGPPVYFVVKNYNYSSESRQTNQLCSISQCDSDSLLNEIAKASLIPESSFIAKPAASWLDDYLVWISPEAFGCCRKFTNGSYCPPDDQPPCCTSSGGGGSCGLNGVCKDCTTCFLHSDLNGGRPSTAQFKEKLPWFLSALPSADCAKGGHGAYTSSVDLKDYENGVIQASSFRTYHTPLNKQVDYINSMRAAQELSSRLSDSLKIEIFPYSVFYMFFEQYLNIWRTALINLAIAIGAVFIVCLIITCSLWTSAIILLVLAMIIVDLMGVMAILNIQLNAISVVNLVMSVGIAVEFCVHLTHAFSVSSGDRNQRMKEALSTMGASVLSGITLTKLVGVLVLCFSRTEVFVVYYFHVYLALVLLGFLHGLVFLPVVLSLFGPPSRCVFVEQQDNRPSTSSQS